{"added":null,"apiVersion":1,"behindSince":null,"buildDepends":["archivers/brotli","archivers/libdeflate","archivers/liblz4","archivers/zstd","biology/fastahack","biology/htslib","biology/smithwaterman","biology/tabixpp","biology/vcflib","biology/wfa2-lib","devel/gettext-runtime","devel/intervaltree","devel/libffi","devel/libunistring","devel/meson","devel/ninja","devel/pkgconf","devel/readline","devel/simde","dns/libidn2","dns/libpsl","ftp/curl","lang/perl5.42","lang/python312","math/mpdecimal","math/multichoose","print/indexinfo","security/libssh2","textproc/expat2","www/libnghttp2"],"categories":["biology"],"comment":"Bayesian haplotype-based polymorphism discovery and genotyping","compare":null,"dependentCount":null,"description":"FreeBayes is a Bayesian genetic variant detector designed to find small\npolymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels\n(insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex\nevents (composite insertion and substitution events) smaller than the length of\na short-read sequencing alignment.","flavors":[],"html":"https://daemonports.org/biology/freebayes/","kind":"port","lastUpdate":"2026-10-08T08:42:17-05:00","license":["MIT"],"maintainer":"ports@FreeBSD.org","name":"freebayes","newest":true,"newestVersion":"1.3.10","noVulnData":false,"origin":"biology/freebayes","otherSystems":[{"behindSince":"2026-09-01","maintainer":"jwb@FreeBSD.org","origin":"biology/freebayes","path":"/dragonfly/biology/freebayes/","system":"DragonFly","version":"1.3.6_2"},{"maintainer":"jwb@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/freebayes","path":"","system":"HardenedBSD","version":"1.3.10"},{"maintainer":"jwb@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/freebayes","path":"","system":"GhostBSD","version":"1.3.10"}],"packages":[{"repo":"FreeBSD:14:latest","versions":["1.3.10","1.3.10","1.3.6_1","-","-"]},{"repo":"FreeBSD:14:quarterly","versions":["1.3.10","1.3.10","n/a","-","-"]},{"repo":"FreeBSD:15:latest","versions":["1.3.10","1.3.10","n/a","-","-"]},{"repo":"FreeBSD:15:quarterly","versions":["1.3.10","1.3.10","n/a","n/a","n/a"]},{"repo":"FreeBSD:16:latest","versions":["1.3.10","1.3.10","n/a","n/a","n/a"]},{"repo":"FreeBSD:16:quarterly","versions":["n/a","n/a","n/a","n/a","n/a"]}],"pkgName":"freebayes-1.3.10","related":null,"repository":"FreeBSD ports","requiredBy":["biology/biostar-tools"],"requiredByCount":1,"runDepends":["archivers/brotli","archivers/libdeflate","archivers/liblz4","archivers/zstd","biology/htslib","devel/libunistring","dns/libidn2","dns/libpsl","ftp/curl","print/indexinfo","security/libssh2","www/libnghttp2"],"status":null,"system":"freebsd","systemLabel":"FreeBSD","version":"1.3.10","versions":[{"commit":"92b409e96b143e14637cb48d824a5c1c8cdfa798","date":"2026-09-01","version":"1.3.10"}],"vulnerabilities":null,"www":"https://github.com/ekg/freebayes"}
