{"added":null,"apiVersion":1,"behindSince":null,"buildDepends":[],"categories":["biology"],"comment":"Multiple alignment program for amino acid or nucleotide sequences","compare":null,"dependentCount":null,"description":"MAFFT offers a range of multiple alignment strategies, L-INS-i\n(accurate; recommended for \u003c200 sequences), FFT-NS-i (standard speed and\naccuracy), FFT-NS-2 (fast; recommended for \u003e2,000 sequences), etc.\nAccording to BAliBASE and other benchmark tests, L-INS-i is one of the\nmost accurate methods currently available.\n\nMAFFT has been described:\n\nK. Katoh and H. Toh 2008 (Briefings in Bioinformatics 9:286-298)\nRecent developments in the MAFFT multiple sequence alignment program.\n\nK. Katoh, K. Misawa, K. Kuma and T. Miyata (Nucleic Acids Res. 30:\n3059-3066, 2002) MAFFT: a novel method for rapid multiple sequence\nalignment based on fast Fourier transform.","flavors":[],"html":"https://daemonports.org/dragonfly/biology/mafft/","kind":"port","lastUpdate":null,"license":["BSD2CLAUSE"],"maintainer":"cartwright@asu.edu","name":"mafft","newest":true,"newestVersion":"7.267","noVulnData":false,"origin":"biology/mafft","otherSystems":[{"maintainer":"cartwright@asu.edu","newest":true,"origin":"biology/mafft","path":"/biology/mafft/","system":"FreeBSD","version":"7.267_1"},{"maintainer":"cartwright@asu.edu","newest":true,"noVulnData":true,"origin":"biology/mafft","path":"","system":"HardenedBSD","version":"7.267_1"},{"maintainer":"cartwright@asu.edu","newest":true,"noVulnData":true,"origin":"biology/mafft","path":"","system":"GhostBSD","version":"7.267_1"}],"packages":null,"pkgName":"mafft-7.267_1","related":null,"repository":"DPorts","requiredBy":[],"requiredByCount":0,"runDepends":[],"status":null,"system":"dragonfly","systemLabel":"DragonFly","version":"7.267_1","versions":null,"vulnerabilities":null,"www":"https://mafft.cbrc.jp/alignment/software/"}