{"added":null,"apiVersion":1,"behindSince":"2026-09-07","buildDepends":[],"categories":["biology","python"],"comment":"Interface to HDF5 files in Oxford Nanopore .fast5 format","compare":null,"dependentCount":null,"description":"The ont_fast5_api is a simple interface to HDF5 files of the Oxford\nNanopore .fast5 file format. It provides:\n\n    o Implementation of the fast5 file schema using h5py library\n    o Methods to interact with and reflect the fast5 file schema\n    o Tools to convert between multi_read and single_read formats\n    o Tools to compress/decompress raw data in files","flavors":[],"html":"https://daemonports.org/dragonfly/biology/py-ont-fast5-api/","kind":"port","lastUpdate":null,"license":["MPL20"],"maintainer":"jwb@FreeBSD.org","name":"py311-ont-fast5-api","newest":false,"newestVersion":"4.1.3","noVulnData":false,"origin":"biology/py-ont-fast5-api","otherSystems":[{"maintainer":"ports@FreeBSD.org","newest":true,"origin":"biology/py-ont-fast5-api","path":"/biology/py-ont-fast5-api/","system":"FreeBSD","updated":"2026-10-08","version":"4.1.3"},{"maintainer":"jwb@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/py-ont-fast5-api","path":"","system":"HardenedBSD","version":"4.1.3"},{"maintainer":"jwb@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/py-ont-fast5-api","path":"","system":"GhostBSD","version":"4.1.3"}],"packages":null,"pkgName":"py311-ont-fast5-api-4.0.2_1","related":null,"repository":"DPorts","requiredBy":[],"requiredByCount":0,"runDepends":["archivers/vbz-compression","devel/py-six","lang/python311","math/py-numpy","misc/py-progressbar","science/py-h5py"],"status":null,"system":"dragonfly","systemLabel":"DragonFly","version":"4.0.2_1","versions":null,"vulnerabilities":null,"www":"https://pypi.python.org/pypi/ont_fast5_api"}