{"added":null,"apiVersion":1,"behindSince":null,"buildDepends":[],"categories":["biology"],"comment":"Spliced Transcripts Alignment to a Reference","compare":null,"dependentCount":null,"description":"STAR (Spliced Transcripts Alignment to a Reference) aims to achieve accurate\nalignment of high-throughput RNA-seq data.\n\nSTAR is based on a previously undescribed RNA-seq alignment algorithm that uses\nsequential maximum mappable seed search in uncompressed suffix arrays followed\nby seed clustering and stitching procedure. STAR outperforms other aligners by\na factor of \u003e50 in mapping speed, aligning to the human genome 550 million 2 x\n76 bp paired-end reads per hour on a modest 12-core server, while at the same\ntime improving alignment sensitivity and precision\n\nWWW: https://github.com/alexdobin/STAR","flavors":[],"html":"https://daemonports.org/dragonfly/biology/star/","kind":"port","lastUpdate":null,"license":["GPLv3"],"maintainer":"jwb@FreeBSD.org","name":"rna-STAR","newest":false,"newestVersion":"2.7.11.a","noVulnData":false,"origin":"biology/star","otherSystems":[{"maintainer":"ports@FreeBSD.org","newest":true,"origin":"biology/star","path":"/biology/star/","system":"FreeBSD","updated":"2026-10-08","version":"2.7.11.a_1"},{"maintainer":"jwb@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/star","path":"","system":"HardenedBSD","version":"2.7.11.a_1"},{"maintainer":"jwb@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/star","path":"","system":"GhostBSD","version":"2.7.11.a_1"}],"packages":null,"pkgName":"rna-STAR-2.7.9.a","related":null,"repository":"DPorts","requiredBy":[],"requiredByCount":0,"runDepends":["biology/htslib"],"status":null,"system":"dragonfly","systemLabel":"DragonFly","version":"2.7.9.a","versions":null,"vulnerabilities":null,"www":"https://github.com/alexdobin/STAR/"}