{"added":null,"apiVersion":1,"behindSince":null,"buildDepends":[],"categories":["biology"],"comment":"Toolkit for nucleic acid k-mer analysis, set operations on k-mers","compare":null,"dependentCount":null,"description":"unikmer is a golang package and a toolkit for nucleic acid k-mer analysis,\nproviding functions including set operation k-mers (sketch) optional with\nTaxIds but without count information.\n\nK-mers are either encoded (k\u003c=32) or hashed (arbitrary k) into uint64, and\nserialized in binary file with extension .unik.\n\nTaxIds can be assigned when counting k-mers from genome sequences, and LCA\n(Lowest Common Ancestor) is computed during set opertions including\ncomputing union, intersecton, set difference, unique and repeated k-mers.","flavors":[],"html":"https://daemonports.org/dragonfly/biology/unikmer/","kind":"port","lastUpdate":null,"license":["MIT"],"maintainer":"yuri@FreeBSD.org","name":"unikmer","newest":true,"newestVersion":"0.20.0","noVulnData":false,"origin":"biology/unikmer","otherSystems":[{"maintainer":"yuri@FreeBSD.org","newest":true,"origin":"biology/unikmer","path":"/biology/unikmer/","system":"FreeBSD","updated":"2026-10-20","version":"0.20.0_27"},{"maintainer":"yuri@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/unikmer","path":"","system":"HardenedBSD","version":"0.20.0_25"},{"maintainer":"yuri@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/unikmer","path":"","system":"GhostBSD","version":"0.20.0_25"}],"packages":null,"pkgName":"unikmer-0.20.0_4","related":null,"repository":"DPorts","requiredBy":[],"requiredByCount":0,"runDepends":[],"status":null,"system":"dragonfly","systemLabel":"DragonFly","version":"0.20.0_4","versions":null,"vulnerabilities":null,"www":"https://bioinf.shenwei.me/unikmer/"}