{"added":null,"apiVersion":1,"behindSince":"2026-09-20","buildDepends":[],"categories":["biology"],"comment":"Versatile open-source tool for metagenomics","compare":"/compare/vsearch/index.json","dependentCount":null,"description":"VSEARCH supports de novo and reference based chimera detection,\nclustering, full-length and prefix dereplication, rereplication,\nreverse complementation, masking, all-vs-all pairwise global\nalignment, exact and global alignment searching, shuffling,\nsubsampling and sorting. It also supports FASTQ file analysis,\nfiltering, conversion and merging of paired-end reads.\n\nThe aim of this project is to create an alternative to the USEARCH\ntool developed by Robert C. Edgar (2010).","flavors":[],"html":"https://daemonports.org/netbsd/biology/vsearch/","kind":"port","lastUpdate":null,"license":["gnu-gpl-v3"],"maintainer":"bacon@NetBSD.org","name":"vsearch","newest":false,"newestVersion":"2.32.0","noVulnData":false,"origin":"biology/vsearch","otherSystems":[{"maintainer":"ports@FreeBSD.org","newest":true,"origin":"biology/vsearch","path":"/biology/vsearch/","system":"FreeBSD","updated":"2026-10-08","version":"2.32.0"},{"maintainer":"jwb@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/vsearch","path":"","system":"HardenedBSD","version":"2.32.0"},{"maintainer":"jwb@FreeBSD.org","newest":true,"noVulnData":true,"origin":"biology/vsearch","path":"","system":"GhostBSD","version":"2.32.0"}],"packages":[{"repo":"NetBSD 10.1 x86_64","versions":["2.29.4"]},{"repo":"NetBSD 10.1 aarch64","versions":["2.29.4"]},{"repo":"SmartOS / illumos x86_64","versions":["-"]},{"repo":"macOS 15 arm64","versions":["2.29.4"]}],"pkgName":"vsearch-2.29.4","related":["wip/vsearch"],"repository":"pkgsrc","requiredBy":[],"requiredByCount":0,"runDepends":[],"status":null,"system":"netbsd","systemLabel":"NetBSD","version":"2.29.4","versions":null,"vulnerabilities":null,"www":"https://github.com/torognes/vsearch"}