{"added":null,"apiVersion":1,"behindSince":null,"buildDepends":[],"categories":["wip","biology"],"comment":"Novel microbial classification engine","compare":null,"dependentCount":null,"description":"[Centrifuge] is a novel microbial classification engine that enables rapid,\naccurate and sensitive labeling of reads and quantification of species on\ndesktop computers. The system uses a novel indexing scheme based on the\nBurrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index, optimized\nspecifically for the metagenomic classification problem.","flavors":[],"html":"https://daemonports.org/netbsd/wip/centrifuge/","kind":"port","lastUpdate":null,"license":["gnu-gpl-v3"],"maintainer":"bacon@NetBSD.org","name":"centrifuge","newest":false,"newestVersion":null,"noVulnData":false,"origin":"wip/centrifuge","otherSystems":[],"packages":null,"pkgName":"centrifuge-1.0.4","related":null,"repository":"pkgsrc-wip","requiredBy":[],"requiredByCount":0,"runDepends":[],"status":null,"system":"netbsd","systemLabel":"NetBSD","version":"1.0.4","versions":null,"vulnerabilities":null,"www":"http://www.ccb.jhu.edu/software/centrifuge/"}