{"added":null,"apiVersion":1,"behindSince":null,"buildDepends":[],"categories":["wip","biology"],"comment":"Gene finder developed specifically for eukaryotes","compare":null,"dependentCount":null,"description":"A gene finder derived from Glimmer, but developed specifically for\neukaryotes. It is based on a dynamic programing algorithm that\nconsiders all combinations of possible exons for inclusion in a gene\nmodel and chooses the best of these combinations. It uses Interpolated\nMarkov Model(IMM) for selecting the best gene model. The system has\nbeen trained for Arabidopsis thaliana, Oryza sativa (rice), and\nPlasmodium falciparum (the malaria parasite), and should work well on\nclosely related organisms.","flavors":[],"html":"https://daemonports.org/netbsd/wip/glimmerm/","kind":"port","lastUpdate":null,"license":[],"maintainer":"pkgsrc-users@NetBSD.org","name":"GlimmerM","newest":false,"newestVersion":null,"noVulnData":false,"origin":"wip/glimmerm","otherSystems":[],"packages":null,"pkgName":"GlimmerM-2.5.1","related":null,"repository":"pkgsrc-wip","requiredBy":[],"requiredByCount":0,"runDepends":[],"status":null,"system":"netbsd","systemLabel":"NetBSD","version":"2.5.1","versions":null,"vulnerabilities":null,"www":"http://www.tigr.org/software/glimmerm/"}