science/py-DendroPy 5.0.1_1 DragonFly

Phylogenetic computing library

System: DragonFly
Repository: DPorts
Maintainer: [email protected] (as in FreeBSD)
License: BSD3CLAUSE
Categories: python, science
Package size: 728.9 KiB, 6243.5 KiB installed

Description

py-DendroPy is a python library for phylogenetic scripting, simulation, data processing and manipulation.

Install

Binary package:

pkg install py311-DendroPy

From DPorts:

cd /usr/dports/science/py-DendroPy && make install clean

Dependencies

Run dependencies 1

lang/python311

Required by 1

biology/checkm

Configuration

No options to configure.

Service scripts: none

Message after installing

If you use this library either in whole or in part in your analysis, or
use any code derived from it, please cite it as:

  Sukumaran, J. and Mark T. Holder. 2010. DendroPy: A Python library
  for phylogenetic computing. Bioinformatics 26: 1569-1571.

===>   NOTICE:

This port is deprecated; you may wish to reconsider installing it:

Depends on expired devel/py-pytest-runner.

It is scheduled to be removed on or after 2025-03-31.