BSD Ports

wip/py-eggnog-mapper 1.0.3 NetBSD

Fast functional annotation of novel DNA or protein sequences

System
NetBSD
Repository
pkgsrc-wip
Maintainer
[email protected]
License
gnu-gpl-v2
Categories
wip, python

Description

eggnog-mapper is a tool for fast functional annotation of novel sequences (genes or proteins) using precomputed eggNOG-based orthology assignments. Obvious examples include the annotation of novel genomes, transcriptomes or even metagenomic gene catalogs. The use of orthology predictions for functional annotation is considered more precise than traditional homology searches, as it avoids transferring annotations from paralogs (duplicate genes with a higher chance of being involved in functional divergence).

Install

From pkgsrc-wip (no binary package):

cd /usr/pkgsrc/wip/py-eggnog-mapper && make install clean

Dependencies

No port depends on this one.