biology/figtree 1.4.5.p.6 FreeBSD
Graphical viewer of phylogenetic trees
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
0f0a7c2e0e- License
- GPLv2
- Categories
- biology, education, java
- Package size
- 3158.3 KiB, 4563.3 KiB installed
Description
FigTree is designed as a graphical viewer of phylogenetic trees and as a program for producing publication-ready figures. As with most of my programs, it was written for my own needs so may not be as polished and feature-complete as a commercial program. In particular it is designed to display summarized and annotated trees produced by BEAST.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | biology/figtree | 1.4.5.p.6 |
| DragonFly | biology/figtree | 1.4.4.14 |
Install
Binary package:
pkg install figtree
From the ports tree:
cd /usr/ports/biology/figtree/ && make install clean
To depend on this port in another port's Makefile:
RUN_DEPENDS= figtree>0:biology/figtree
Packages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 1.4.4.14_2 | 1.4.4.14_2 | - | - | 1.4.5.p.6 |
| FreeBSD:14:quarterly | 1.4.4.14_2 | 1.4.4.14_2 | n/a | - | 1.4.4.14_2 |
| FreeBSD:15:latest | 1.4.4.14_2 | 1.4.5.p.6 | n/a | - | 1.4.4.14 |
| FreeBSD:15:quarterly | 1.4.4.14_2 | 1.4.4.14_2 | n/a | n/a | n/a |
| FreeBSD:16:latest | 1.4.4.14_2 | 1.4.5.p.6 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
The Makefile names none itself; they come from USES and USE_*.
The full lists below include those, and their dependencies in turn.
Build dependencies 55
- archivers/brotli
- archivers/libdeflate
- archivers/liblz4
- archivers/zstd
- audio/alsa-lib
- converters/libiconv
- devel/apache-ant
- devel/gettext-runtime
- devel/glib20
- devel/libffi
- devel/libinotify
- devel/pcre2
- devel/py-packaging
- devel/readline
- graphics/giflib
- graphics/graphite2
- graphics/jbigkit
- graphics/jpeg-turbo
- graphics/lcms2
- graphics/lerc
- graphics/png
- graphics/tiff
- java/javavmwrapper
- java/openjdk17
- java/openjdk21
- lang/python312
- lang/python315
- math/mpdecimal
- print/freetype2
- print/harfbuzz
- print/indexinfo
- textproc/expat2
- x11-fonts/dejavu
- x11-fonts/encodings
- x11-fonts/font-bh-ttf
- x11-fonts/font-misc-ethiopic
- x11-fonts/font-misc-meltho
- x11-fonts/fontconfig
- x11-fonts/libfontenc
- x11-fonts/mkfontscale
- x11-fonts/xorg-fonts-truetype
- x11-toolkits/libXt
- x11/libICE
- x11/libSM
- x11/libX11
- x11/libXau
- x11/libXdmcp
- x11/libXext
- x11/libXfixes
- x11/libXi
- x11/libXrandr
- x11/libXrender
- x11/libXtst
- x11/libxcb
- x11/xorgproto
No port depends on this one.
Configuration
No options to configure.
- USES
- java:ant
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| rambaut-figtree-v1.4.5pre-6-g24c51ad_GH0.tar.gz | 2.3091158e+07 | 8c609734adccf80f8b0b2b8f4272d2ac1eb8b303649640153b431eb81a27c2f5 |