BSD Portsbiology/mothur 1.48.6 FreeBSD
Software for bioinformatics of the microbial ecology community
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
87991a969d- License
- GPLv3
- Categories
- biology
- Package size
- 4468.9 KiB, 13912.2 KiB installed
Description
This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | biology/mothur | 1.48.6 |
| NetBSD | wip/mothur | 1.40.5 |
| DragonFly | biology/mothur | 1.48.2 |
| HardenedBSD | biology/mothur | 1.48.6 |
| GhostBSD | biology/mothur | 1.48.6 |
Install
Binary package:
pkg install mothurFrom the ports tree:
cd /usr/ports/biology/mothur/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= mothur>0:biology/mothurPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 1.48.6 | 1.48.6 | 1.48.0 | 1.48.2 | 1.48.6 |
| FreeBSD:14:quarterly | 1.48.6 | 1.48.6 | n/a | 1.48.2 | 1.48.6 |
| FreeBSD:15:latest | 1.48.6 | 1.48.6 | n/a | 1.48.2 | 1.48.2 |
| FreeBSD:15:quarterly | 1.48.6 | 1.48.6 | n/a | n/a | n/a |
| FreeBSD:16:latest | 1.48.6 | 1.48.6 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 1
bash: shells/bash
The full lists below include those, and their dependencies in turn.
Build dependencies 5
Run dependencies 2
No port depends on this one.
Configuration
No options to configure.
- USES
- compiler:c++11-lang gmake localbase readline
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| mothur-mothur-v1.48.6_GH0.tar.gz | 1.65326e+06 | 8a5ff6b02206e85ca1172d112e3ea7bb0a4db70e6946e779441167a867f75352 |