biology/py-PySCeS 1.2.3 FreeBSD
Python Simulator for Cellular Systems
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- BSD3CLAUSE
- Categories
- biology, python
- Package size
- 1326.8 KiB, 6581.8 KiB installed
Description
PySCeS provides a variety of tools for the analysis of cellular systems.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | biology/py-PySCeS | 1.2.3 |
| DragonFly | biology/py-PySCeS | 1.2.2 |
Install
Binary package:
pkg install py312-pysces
From the ports tree:
cd /usr/ports/biology/py-PySCeS/ && make install clean
To depend on this port in another port's Makefile:
RUN_DEPENDS= py312-pysces>0:biology/py-PySCeS
Packages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 1.2.3 | 1.2.3 | - | 1.2.2 | 1.2.3 |
| FreeBSD:14:quarterly | 1.2.3 | 1.2.3 | n/a | 1.2.2 | 1.2.3 |
| FreeBSD:15:latest | 1.2.3 | 1.2.3 | n/a | 1.2.2 | 1.2.2 |
| FreeBSD:15:quarterly | 1.2.3 | 1.2.3 | n/a | n/a | n/a |
| FreeBSD:16:latest | 1.2.3 | 1.2.3 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 2
${PYTHON_PKGNAMEPREFIX}meson-python>0: devel/meson-python${PYTHON_PKGNAMEPREFIX}numpy>=2.0.0,1: math/py-numpy
Runtime 5
${PYTHON_PKGNAMEPREFIX}numpy>=1.23.5,1: math/py-numpy${PYTHON_PKGNAMEPREFIX}matplotlib>0: math/py-matplotlib${PYTHON_PKGNAMEPREFIX}scipy>0: science/py-scipy${PYTHON_PKGNAMEPREFIX}numdifftools>0: math/py-numdifftools${PYTHON_PKGNAMEPREFIX}python-libsbml>0: biology/py-python-libsbml
The full lists below include those, and their dependencies in turn.
Build dependencies 26
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/gettext-runtime
- devel/libffi
- devel/meson
- devel/meson-python
- devel/ninja
- devel/py-build
- devel/py-installer
- devel/py-packaging
- devel/py-pyproject-hooks
- devel/py-pyproject-metadata
- devel/readline
- lang/gcc14
- lang/python312
- lang/python315
- math/gmp
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-numpy
- print/indexinfo
- sysutils/patchelf
- textproc/expat2
Run dependencies 82
- archivers/brotli
- archivers/libdeflate
- archivers/liblz4
- archivers/py-brotli
- archivers/py-zopfli
- archivers/zopfli
- archivers/zstd
- biology/py-python-libsbml
- converters/fribidi
- converters/libiconv
- devel/binutils
- devel/gettext-runtime
- devel/glib20
- devel/libffi
- devel/libinotify
- devel/pcre2
- devel/py-cycler
- devel/py-lxml
- devel/py-olefile
- devel/py-packaging
- devel/py-pyparsing
- devel/py-python-dateutil
- devel/py-six
- devel/py-unicodedata2
- devel/readline
- graphics/gdk-pixbuf2
- graphics/giflib
- graphics/graphite2
- graphics/jbigkit
- graphics/jpeg-turbo
- graphics/lcms2
- graphics/lerc
- graphics/libavif
- graphics/libimagequant
- graphics/libyuv
- graphics/openjpeg
- graphics/png
- graphics/py-pillow
- graphics/tiff
- graphics/webp
- lang/gcc14
- lang/python312
- lang/python315
- lang/tcl86
- math/gmp
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-contourpy
- math/py-kiwisolver
- math/py-matplotlib
- math/py-numdifftools
- math/py-numpy
- math/qhull
- misc/shared-mime-info
- multimedia/aom
- multimedia/dav1d
- multimedia/vmaf
- print/freetype2
- print/harfbuzz
- print/indexinfo
- print/libraqm
- print/py-fonttools
- science/py-scipy
- security/libgcrypt
- security/libgpg-error
- textproc/expat2
- textproc/libxml2
- textproc/libxslt
- x11-fonts/fontconfig
- x11-fonts/libXft
- x11-toolkits/py-tkinter
- x11-toolkits/tk86
- x11/libX11
- x11/libXScrnSaver
- x11/libXau
- x11/libXdmcp
- x11/libXext
- x11/libXrender
- x11/libxcb
- x11/xorgproto
No port depends on this one.
Configuration
No options to configure.
- USES
- fortran localbase:ldflags python
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| pysces-1.2.3.tar.gz | 2.775077e+06 | 437487624c3127f0bc5adc28b639a3ee4cbe614f2554857b3ab4c1f3813ffe42 |
Master sites 1
- PYPI
Commit history 0
No commits in the history this site was built from.