BSD Ports

biology/py-pybigwig 0.3.22_1 FreeBSD

Python access to bigWig files using libBigWig

System
FreeBSD
Repository
FreeBSD ports
Maintainer
[email protected]
Last update
Commit
2414383046
License
MIT
Categories
biology, python
Package size
56.4 KiB, 208.2 KiB installed

Description

A python extension, written in C, for quick access to bigBed files and access to and creation of bigWig files. This extension uses libBigWig for local and remote file access.

In the other systems

SystemPortVersion
FreeBSDbiology/py-pybigwig0.3.22_1
DragonFlybiology/py-pybigwig0.3.22_1
HardenedBSDbiology/py-pybigwig0.3.22_1
GhostBSDbiology/py-pybigwig0.3.22_1

Install

Binary package:

pkg install py312-pyBigWig

From the ports tree:

cd /usr/ports/biology/py-pybigwig/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	py312-pyBigWig>0:biology/py-pybigwig

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repositoryaarch64amd64armv6armv7i386
FreeBSD:14:latest0.3.22_10.3.22_10.3.180.3.22_10.3.22_1
FreeBSD:14:quarterly0.3.22_10.3.22_1n/a0.3.22_10.3.22_1
FreeBSD:15:latest0.3.22_10.3.22_1n/a0.3.22_10.3.22_1
FreeBSD:15:quarterly0.3.22_10.3.22_1n/an/an/a
FreeBSD:16:latest0.3.22_10.3.22_1n/an/an/a
FreeBSD:16:quarterlyn/an/an/an/an/a

Dependencies

As this port's Makefile names them.

Library 1

The full lists below include those, and their dependencies in turn.

Build dependencies 18
Run dependencies 16

Configuration

No options to configure.

USES
localbase python
Service scripts
none

Message after installing

===>   NOTICE:

The py312-pyBigWig port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://docs.freebsd.org/en/articles/contributing/#ports-contributing

Files

distinfo 1
FileSizeSHA256
pyBigWig-0.3.22.tar.gz738645d4426f754bd7b7f6dc21d6c3f93b58a96a65b6eb2e578ae03b31a71272d2243
Master sites 1
  • PYPI

Commit history 1

DateCommitCreditsLog message
2414383046 Jason W. Bacon Release numerous ports to ports@
I've been retired for a few years, and it is unlikely I will be doing any more scientific computing support in the future. I have continued to maintain ~160 ports to the best of my ability, mainly as a favor to the community, but I can no longer justify the time and effort required. I am therefore releasing most of my scientific ports, along with a few others, to ports@. I will continue to maintain ports I am actively using and those for which I am upstream.