BSD Portsbiology/py-resdk 22.2.3 FreeBSD
Resolwe SDK to interact with Resolwe server and Resolwe Bioinformatics
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
e7ab08dd27- License
- APACHE20
- Categories
- biology, python
- Package size
- 183.8 KiB, 1068.1 KiB installed
Description
Resolwe SDK for Python supports interaction with Resolwe server and its extension Resolwe Bioinformatics. You can use it to upload and inspect biomedical data sets, contribute annotations, run analysis, and write pipelines.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | biology/py-resdk | 22.2.3 |
| DragonFly | biology/py-resdk | 21.2.1 |
| HardenedBSD | biology/py-resdk | 22.2.3 |
| GhostBSD | biology/py-resdk | 22.2.3 |
Install
Binary package:
pkg install py312-resdkFrom the ports tree:
cd /usr/ports/biology/py-resdk/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= py312-resdk>0:biology/py-resdkPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 22.2.3 | 22.2.3 | - | 22.0.0 | 22.2.3 |
| FreeBSD:14:quarterly | 22.2.3 | 22.2.3 | n/a | 22.0.0 | 22.2.3 |
| FreeBSD:15:latest | 22.2.3 | 22.2.3 | n/a | 22.0.0 | 22.0.0 |
| FreeBSD:15:quarterly | 22.2.3 | 22.2.3 | n/a | n/a | n/a |
| FreeBSD:16:latest | 22.2.3 | 22.2.3 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 2
${PYTHON_PKGNAMEPREFIX}setuptools-scm>=9.2.2: devel/py-setuptools-scm${PYTHON_PKGNAMEPREFIX}wheel>0: devel/py-wheel
Runtime 15
${PYTHON_PKGNAMEPREFIX}aiohttp>=3.13.2: www/py-aiohttp${PYTHON_PKGNAMEPREFIX}boto3>0: www/py-boto3${PYTHON_PKGNAMEPREFIX}boto3-stubs>0: www/py-boto3-stubs${PYTHON_PKGNAMEPREFIX}mypy-boto3-s3>0: devel/py-mypy-boto3-s3${PYTHON_PKGNAMEPREFIX}openpyxl>0: textproc/py-openpyxl${PYTHON_PKGNAMEPREFIX}packaging>0: devel/py-packaging${PYTHON_PKGNAMEPREFIX}pandas>0: math/py-pandas${PYTHON_PKGNAMEPREFIX}pytz>0: devel/py-pytz${PYTHON_PKGNAMEPREFIX}requests>0: www/py-requests${PYTHON_PKGNAMEPREFIX}slumber>=0.7.1: www/py-slumber${PYTHON_PKGNAMEPREFIX}tqdm>0: misc/py-tqdm${PYTHON_PKGNAMEPREFIX}tzlocal>0: devel/py-tzlocal${PYTHON_PKGNAMEPREFIX}urllib3>=2: net/py-urllib3${PYTHON_PKGNAMEPREFIX}wrapt>0: devel/py-wrapt${PYTHON_PKGNAMEPREFIX}xlrd>0: textproc/py-xlrd
The full lists below include those, and their dependencies in turn.
Build dependencies 17
Run dependencies 61
- archivers/liblz4
- archivers/zstd
- databases/py-sqlite3
- databases/sqlite3
- devel/binutils
- devel/gettext-runtime
- devel/libedit
- devel/libffi
- devel/py-aiosignal
- devel/py-attrs
- devel/py-botocore
- devel/py-frozenlist
- devel/py-jmespath
- devel/py-mypy-boto3-s3
- devel/py-packaging
- devel/py-propcache
- devel/py-python-dateutil
- devel/py-pytz
- devel/py-six
- devel/py-types-s3transfer
- devel/py-typing-extensions
- devel/py-tzdata
- devel/py-tzlocal
- devel/py-wrapt
- devel/readline
- dns/py-idna
- lang/gcc14
- lang/python312
- lang/python315
- lang/tcl86
- math/gmp
- math/libtommath
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-bottleneck
- math/py-numexpr
- math/py-numpy
- math/py-pandas
- misc/py-tqdm
- net/py-aiohappyeyeballs
- net/py-pysocks
- net/py-s3transfer
- net/py-urllib3
- print/indexinfo
- security/py-certifi
- textproc/expat2
- textproc/py-charset-normalizer
- textproc/py-et_xmlfile
- textproc/py-openpyxl
- textproc/py-xlrd
- www/llhttp
- www/py-aiohttp
- www/py-boto3
- www/py-boto3-stubs
- www/py-botocore-stubs
- www/py-multidict
- www/py-requests
- www/py-slumber
- www/py-yarl
No port depends on this one.
Configuration
No options to configure.
- USES
- python
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| resdk-22.2.3.tar.gz | 273333 | 6f733082e1cfe7612f75b4bb23185eeff75877144ed880227fe22688318ae387 |
Master sites 1
- PYPI