biology/rubygem-bio-executables 1.0.0
Collection of miscellaneous utilities for bioinformatics
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- BSD2CLAUSE, RUBY
- Categories
- biology, rubygems
- Package size
- 13.3 KiB, 38.5 KiB installed
Description
bio-executables is a collection of miscellaneous utilities for bioinformatics that were formerly part of the BioRuby core ("bio" gem). Because of reducing complexity, they were moved to this gem.
This code has historically been part of the BioRuby gem, but has been split into its own gem as part of an effort to modularize BioRuby. bio-executables and many more plugins are available at biogems.info.
Install
As a binary package — by origin, or by package name:
pkg install biology/rubygem-bio-executables
pkg install rubygem-bio-executablesFrom the ports tree:
cd /usr/ports/biology/rubygem-bio-executables/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= rubygem-bio-executables>0:biology/rubygem-bio-executablesPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 1.0.0 | 1.0.0 | 1.0.0 | 1.0.0 | 1.0.0 |
| FreeBSD:14:quarterly | 1.0.0 | 1.0.0 | n/a | 1.0.0 | 1.0.0 |
| FreeBSD:15:latest | 1.0.0 | 1.0.0 | n/a | 1.0.0 | 1.0.0 |
| FreeBSD:15:quarterly | 1.0.0 | 1.0.0 | n/a | n/a | n/a |
| FreeBSD:16:latest | 1.0.0 | 1.0.0 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Runtime 2
rubygem-bio>=2.0.0: biology/rubygem-biorubygem-bio-old-biofetch-emulator>=0.0.1: biology/rubygem-bio-old-biofetch-emulator
The full lists below include those, and their dependencies in turn.
All build dependencies 6
All run dependencies 8
No port depends on this one.
Configuration
No options to configure.
- USES
- gem
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| rubygem/bio-executables-1.0.0.gem | 15360 | 29f02115bc543d7f39b0c6d4c518719dcae9d112a913c215b988b599a6736b91 |
Master sites 1
- RG
Commit history 0
No commits in the history this site was built from.