BSD Ports

biology/rubygem-bio-shell 1.0.1 FreeBSD

Command-line interface on BioRuby

System
FreeBSD
Repository
FreeBSD ports
Maintainer
[email protected]
License
BSD2CLAUSE, RUBY
Categories
biology, rubygems
Package size
43.9 KiB, 114.4 KiB installed

Description

bio-shell, providing BioRuby Shell, is a command-line interface for BioRuby, an open source bioinformatics library for Ruby.

This code has historically been part of the BioRuby gem, but has been split into its own gem as part of an effort to modularize BioRuby. bio-shell and many more plugins are available at biogems.info.

In the other systems

SystemPortVersion
FreeBSDbiology/rubygem-bio-shell1.0.1
DragonFlybiology/rubygem-bio-shell1.0.1
MidnightBSDbiology/rubygem-bio-shell1.0.1

Install

Binary package:

pkg install rubygem-bio-shell

From the ports tree:

cd /usr/ports/biology/rubygem-bio-shell/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	rubygem-bio-shell>0:biology/rubygem-bio-shell

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repositoryaarch64amd64armv6armv7i386
FreeBSD:14:latest1.0.11.0.11.0.11.0.11.0.1
FreeBSD:14:quarterly1.0.11.0.1n/a1.0.11.0.1
FreeBSD:15:latest1.0.11.0.1n/a1.0.11.0.1
FreeBSD:15:quarterly1.0.11.0.1n/an/an/a
FreeBSD:16:latest1.0.11.0.1n/an/an/a
FreeBSD:16:quarterlyn/an/an/an/an/a

Dependencies

As this port's Makefile names them.

Runtime 1

The full lists below include those, and their dependencies in turn.

Build dependencies 6
Run dependencies 7

No port depends on this one.

Configuration

No options to configure.

USES
gem
Service scripts
none
Conflicts with
ruby??-bio

Files

distinfo 1
FileSizeSHA256
rubygem/bio-shell-1.0.1.gem465920adddaab0e1579940820829b777d0f567859e914c2bb2feca3d6c9b12dfbe390
Master sites 1
  • RG

Commit history 0

No commits in the history this site was built from.