BSD Ports

biology/treekin 0.5.1_7 FreeBSD

Efficient computation of RNA folding dynamics

System
FreeBSD
Repository
FreeBSD ports
Maintainer
[email protected]
License
LatticeLib
Categories
biology
Package size
50.5 KiB, 104.2 KiB installed

Description

treekin computes folding dynamics on coarse grained version of an energy landscape, where all conformations belonging to the same local minimum have been contracted into a single macro-state.

In the other systems

SystemPortVersion
FreeBSDbiology/treekin0.5.1_7
DragonFlybiology/treekin0.5.1_7
HardenedBSDbiology/treekin0.5.1_7
GhostBSDbiology/treekin0.5.1_7

Install

Binary package:

pkg install treekin

From the ports tree:

cd /usr/ports/biology/treekin/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	treekin>0:biology/treekin

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repositoryaarch64amd64armv6armv7i386
FreeBSD:14:latest0.5.1_70.5.1_7-0.5.1_70.5.1_7
FreeBSD:14:quarterly0.5.1_70.5.1_7n/a0.5.1_70.5.1_7
FreeBSD:15:latest0.5.1_70.5.1_7n/a0.5.1_70.5.1_7
FreeBSD:15:quarterly0.5.1_70.5.1_7n/an/an/a
FreeBSD:16:latest0.5.1_70.5.1_7n/an/an/a
FreeBSD:16:quarterlyn/an/an/an/an/a

Dependencies

As this port's Makefile names them.

Build 1

The full lists below include those, and their dependencies in turn.

Build dependencies 13
Run dependencies 10

No port depends on this one.

Configuration

No options to configure.

USES
blaslapack:netlib compiler:c++11-lang fortran gmake localbase:ldflags
Service scripts
none

Files

distinfo 1
FileSizeSHA256
Treekin-0.5.1.tar.gz222232aae56c1a746829b02a9b97c6a54d1d58348718d4ca585ef41a5dbdd41d5c9f06
Master sites 1
  • https://www.tbi.univie.ac.at/RNA/packages/source/

Commit history 0

No commits in the history this site was built from.