devel/py-anndata 0.13.4 FreeBSD
Annotated data
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
7d190bca2d- License
- BSD3CLAUSE
- Categories
- devel, python
Description
anndata is a Python package for handling annotated data matrices in memory and on disk, positioned between pandas and xarray. anndata offers a broad range of computationally efficient features including, among others, sparse data support, lazy operations, and a PyTorch interface.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | devel/py-anndata | 0.13.4 |
| DragonFly | devel/py-anndata | 0.11.3 |
Install
Binary package:
pkg install py312-anndataFrom the ports tree:
cd /usr/ports/devel/py-anndata/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= py312-anndata>0:devel/py-anndataPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | - | 0.13.4 | - | 0.12.1 | 0.13.4 |
| FreeBSD:14:quarterly | - | 0.13.4 | n/a | 0.11.4 | 0.13.4 |
| FreeBSD:15:latest | - | 0.13.4 | n/a | 0.12.1 | 0.12.1 |
| FreeBSD:15:quarterly | - | 0.13.4 | n/a | n/a | n/a |
| FreeBSD:16:latest | - | 0.13.4 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 2
${PYTHON_PKGNAMEPREFIX}hatch-vcs>=0: devel/py-hatch-vcs${PYTHON_PKGNAMEPREFIX}hatchling>=0: devel/py-hatchling
Runtime 11
${PYTHON_PKGNAMEPREFIX}array-api-compat>=1.7.1: devel/py-array-api-compat${PYTHON_PKGNAMEPREFIX}h5py>=3.11: science/py-h5py${PYTHON_PKGNAMEPREFIX}legacy-api-wrap>=0: devel/py-legacy-api-wrap${PYTHON_PKGNAMEPREFIX}natsort>=0: devel/py-natsort${PYTHON_PKGNAMEPREFIX}numpy>=2.1,1: math/py-numpy${PYTHON_PKGNAMEPREFIX}packaging>=24.2: devel/py-packaging${PYTHON_PKGNAMEPREFIX}pandas>=2.3,1<3,1: math/py-pandas${PYTHON_PKGNAMEPREFIX}pooch>=0: devel/py-pooch${PYTHON_PKGNAMEPREFIX}scipy>=1.14: science/py-scipy${PYTHON_PKGNAMEPREFIX}scverse-misc>=0.1.0: devel/py-scverse-misc${PYTHON_PKGNAMEPREFIX}zarr>=3.1: devel/py-zarr
The full lists below include those, and their dependencies in turn.
Build dependencies 22
- archivers/liblz4
- archivers/zstd
- devel/gettext-runtime
- devel/libffi
- devel/py-build
- devel/py-hatch-vcs
- devel/py-hatchling
- devel/py-installer
- devel/py-packaging
- devel/py-pathspec
- devel/py-pluggy
- devel/py-pyproject-hooks
- devel/py-setuptools
- devel/py-setuptools-scm
- devel/py-trove-classifiers
- devel/readline
- lang/python312
- lang/python315
- math/mpdecimal
- print/indexinfo
- textproc/expat2
- textproc/py-tomlkit
Run dependencies 70
- archivers/liblz4
- archivers/zstd
- databases/py-sqlite3
- databases/sqlite3
- devel/binutils
- devel/crc32c
- devel/gettext-runtime
- devel/libedit
- devel/libffi
- devel/py-array-api-compat
- devel/py-cffi
- devel/py-donfig
- devel/py-google-crc32c
- devel/py-legacy-api-wrap
- devel/py-msgspec
- devel/py-natsort
- devel/py-packaging
- devel/py-platformdirs
- devel/py-pooch
- devel/py-pyasn1
- devel/py-pycparser
- devel/py-python-dateutil
- devel/py-pytz
- devel/py-pyyaml
- devel/py-scverse-misc
- devel/py-session-info2
- devel/py-six
- devel/py-typing-extensions
- devel/py-tzdata
- devel/py-wheel
- devel/py-xxhash
- devel/py-zarr
- devel/readline
- devel/xxhash
- dns/py-idna
- lang/gcc14
- lang/python312
- lang/python315
- lang/tcl86
- math/gmp
- math/libtommath
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-bottleneck
- math/py-numexpr
- math/py-numpy
- math/py-pandas
- math/qhull
- misc/py-numcodecs
- misc/py-tqdm
- net/py-pysocks
- net/py-urllib3
- print/indexinfo
- science/hdf5
- science/libaec
- science/py-h5py
- science/py-scipy
- security/libsodium
- security/py-bcrypt
- security/py-certifi
- security/py-cryptography
- security/py-paramiko
- security/py-pynacl
- textproc/expat2
- textproc/libyaml
- textproc/py-charset-normalizer
- textproc/py-tomli-w
- www/py-requests
Required by 2
Configuration
No options to configure.
- USES
- python:3.12+
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| anndata-0.13.4.tar.gz | 2.376085e+06 | fadee3955b4b826dd23d9c0aa296147d8624f8222210b6c8abc3c115a111dce4 |
Master sites 1
- PYPI