BSD Portsbiology/bamtools 2.5.2_2 DragonFly
API and toolkit for handling BAM files
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- MIT
- Categories
- biology
- Package size
- 347.9 KiB, 1205.7 KiB installed
Description
BamTools provides both a programmer's API and an end-user's toolkit for handling BAM files.
BAM is the binary alternative to the sequence alignment/map (SAM) format used for storing genetic sequence data. It uses BGZF block compression implemented on top of the standard gzip file format to provide good compression while allowing efficient random access for indexed queries.
In the other systems
| System | Port | Version |
|---|---|---|
| DragonFly | biology/bamtools | 2.5.2_2 |
| FreeBSD | biology/bamtools | 2.5.3 |
| NetBSD | wip/bamtools | 2.5.3 |
| HardenedBSD | biology/bamtools | 2.5.3 |
| GhostBSD | biology/bamtools | 2.5.3 |
Install
Binary package:
pkg install bamtoolsFrom DPorts:
cd /usr/dports/biology/bamtools && make install cleanDependencies
Run dependencies 1
No port depends on this one.