BSD Portsbiology/hyphy 2.5.70 DragonFly
Hypothesis testing using Phylogenies
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- MIT
- Categories
- biology
- Package size
- 1715.2 KiB, 7483.5 KiB installed
Description
HyPhy is an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning. It features a rich scripting language for limitless customization of analyses. Additionally, HyPhy features support for parallel computing environments via message passing interface, MPI and it can be compiled as a shared library and called from other programming environments such as Python and R.
In the other systems
The newest version among them is 2.5.103, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| DragonFly | biology/hyphy | 2.5.70 behind since 2026-10-11 | none known | - | [email protected] | - |
| FreeBSD | biology/hyphy | 2.5.103 newest | none known | - | [email protected] | 2026-10-11 |
| HardenedBSD | biology/hyphy | 2.5.101 behind since 2026-10-11 | no data | - | [email protected] | - |
| GhostBSD | biology/hyphy | 2.5.101 behind since 2026-10-11 | no data | - | [email protected] | - |
Install
Binary package:
pkg install hyphyFrom DPorts:
cd /usr/dports/biology/hyphy && make install cleanDependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 1
No port depends on this one.