BSD Ports

biology/peak-classifier 0.1.4.13_1 DragonFly

Classify ChIP/ATAC-Seq peaks based on features provided in a GFF

System
DragonFly
Repository
DPorts
Maintainer
[email protected] (as in FreeBSD)
License
BSD2CLAUSE
Categories
biology
Package size
14.1 KiB, 31.8 KiB installed

Description

Classify ChIP/ATAC-Seq peaks based on features provided in a GFF Peaks are provided in a BED file sorted by chromosome and position. The GFF must be sorted by chromosome and position, with gene-level features separated by ### tags and each gene organized into subfeatures such as transcripts and exons. This is the default for common data sources.

In the other systems

SystemPortVersion
DragonFlybiology/peak-classifier0.1.4.13_1
FreeBSDbiology/peak-classifier0.1.4.13_2
NetBSDbiology/peak-classifier0.1.4.21
HardenedBSDbiology/peak-classifier0.1.4.13_2
GhostBSDbiology/peak-classifier0.1.4.13_2

Install

Binary package:

pkg install peak-classifier

From DPorts:

cd /usr/dports/biology/peak-classifier && make install clean

Dependencies

Run dependencies 5

No port depends on this one.