biology/peak-classifier 0.1.4.13_1 DragonFly
Classify ChIP/ATAC-Seq peaks based on features provided in a GFF
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- BSD2CLAUSE
- Categories
- biology
- Package size
- 14.1 KiB, 31.8 KiB installed
Description
Classify ChIP/ATAC-Seq peaks based on features provided in a GFF Peaks are provided in a BED file sorted by chromosome and position. The GFF must be sorted by chromosome and position, with gene-level features separated by ### tags and each gene organized into subfeatures such as transcripts and exons. This is the default for common data sources.
In the other systems
| System | Port | Version |
|---|---|---|
| DragonFly | biology/peak-classifier | 0.1.4.13_1 |
| FreeBSD | biology/peak-classifier | 0.1.4.13_2 |
| NetBSD | biology/peak-classifier | 0.1.4.21 |
| HardenedBSD | biology/peak-classifier | 0.1.4.13_2 |
| GhostBSD | biology/peak-classifier | 0.1.4.13_2 |
Install
Binary package:
pkg install peak-classifier
From DPorts:
cd /usr/dports/biology/peak-classifier && make install clean
Dependencies
No port depends on this one.