BSD Portsbiology/peak-classifier 0.1.4.21 NetBSD
Classify ChIP/ATAC-Seq peaks based on features provided in a GFF
- System
- NetBSD
- Repository
- pkgsrc
- Maintainer
- [email protected]
- License
- 2-clause-bsd
- Categories
- biology
- Package size
- 13.6 KiB, 40.8 KiB installed
Description
Classify ChIP/ATAC-Seq peaks based on features provided in a GFF Peaks are provided in a BED file sorted by chromosome and position. The GFF must be sorted by chromosome and position, with gene-level features separated by ### tags and each gene organized into subfeatures such as transcripts and exons. This is the default for common data sources.
In the other systems
| System | Port | Version |
|---|---|---|
| NetBSD | biology/peak-classifier | 0.1.4.21 |
| FreeBSD | biology/peak-classifier | 0.1.4.13_2 |
| DragonFly | biology/peak-classifier | 0.1.4.13_1 |
| HardenedBSD | biology/peak-classifier | 0.1.4.13_2 |
| GhostBSD | biology/peak-classifier | 0.1.4.13_2 |
Install
Binary package:
pkgin install peak-classifierFrom pkgsrc:
cd /usr/pkgsrc/biology/peak-classifier && make install cleanPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | Version |
|---|---|
| NetBSD 10.1 x86_64 | 0.1.4.21 |
| NetBSD 10.1 aarch64 | 0.1.4.21 |
| SmartOS / illumos x86_64 | 0.1.4.21 |
| macOS 15 arm64 | 0.1.4.21 |