wip/peak-classifier 0.1.4.21 NetBSD
Classify ChIP/ATAC-Seq peaks based on features provided in a GFF
- System
- NetBSD
- Repository
- pkgsrc-wip
- Maintainer
- [email protected]
- License
- 2-clause-bsd
- Categories
- wip, biology
Description
Classify ChIP/ATAC-Seq peaks based on features provided in a GFF Peaks are provided in a BED file sorted by chromosome and position. The GFF must be sorted by chromosome and position, with gene-level features separated by ### tags and each gene organized into subfeatures such as transcripts and exons. This is the default for common data sources.
In the other systems
| System | Port | Version |
|---|---|---|
| NetBSD | wip/peak-classifier | 0.1.4.21 |
| FreeBSD | biology/peak-classifier | 0.1.4.13_2 |
| DragonFly | biology/peak-classifier | 0.1.4.13_1 |
| HardenedBSD | biology/peak-classifier | 0.1.4.13_2 |
| GhostBSD | biology/peak-classifier | 0.1.4.13_2 |
Install
From pkgsrc-wip (no binary package):
cd /usr/pkgsrc/wip/peak-classifier && make install clean