wip/chip-seq 1.2 NetBSD
Core tools needed for ChIP-Seq analysis
- System
- NetBSD
- Repository
- pkgsrc-wip
- Maintainer
- [email protected]
- Categories
- wip, biology, meta-pkgs
Description
The chip-seq meta-package provides the core tools needed for performing a typical ChIP-Seq differential accessibility analysis, including adapter trimming, quality control, alignment, peak calling, and identification of differentially accessible peaks. Researchers may want additional tools for data manipulation, gene ontology, etc.
In the other systems
| System | Port | Version |
|---|---|---|
| NetBSD | wip/chip-seq | 1.2 |
| FreeBSD | biology/chip-seq | 0.3.1 |
| HardenedBSD | biology/chip-seq | 0.3.1 |
Install
From pkgsrc-wip (no binary package):
cd /usr/pkgsrc/wip/chip-seq && make install clean
Dependencies
Run dependencies 17
No port depends on this one.