BSD Portsbiology/fastqc 0.11.9nb2 NetBSD
Quality control tool for high throughput sequence data
- System
- NetBSD
- Repository
- pkgsrc
- Maintainer
- [email protected]
- License
- gnu-gpl-v3
- Categories
- biology
- Package size
- 9488.2 KiB, 10981.0 KiB installed
Description
FastQC aims to provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines. It provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis.
In the other systems
The newest version among them is 0.12.1, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| NetBSD | biology/fastqc | 0.11.9nb2 | none known | - | [email protected] | - |
| FreeBSD | biology/fastqc | 0.12.1_2 newest | none known | - | [email protected] | 2026-10-08 |
| DragonFly | biology/fastqc | 0.12.1 newest | none known | - | [email protected] | - |
| HardenedBSD | biology/fastqc | 0.12.1_2 newest | no data | - | [email protected] | - |
| GhostBSD | biology/fastqc | 0.12.1_2 newest | no data | - | [email protected] | - |
Install
Binary package:
pkgin install fastqcFrom pkgsrc:
cd /usr/pkgsrc/biology/fastqc && make install cleanPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | Version |
|---|---|
| NetBSD 10.1 x86_64 | 0.11.9nb2 |
| NetBSD 10.1 aarch64 | 0.11.9nb2 |
| SmartOS / illumos x86_64 | 0.11.9nb2 |
| macOS 15 arm64 | 0.11.9nb2 |
Dependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.