BSD Ports

wip/rna-seq 1.3.0 NetBSD

Core tools needed for RNA-Seq analysis

System
NetBSD
Repository
pkgsrc-wip
Maintainer
[email protected]
Categories
wip, biology, meta-pkgs

Description

The rna-seq meta-package provides the core tools needed for performing a typical RNA-Seq differential gene expression analysis, including adapter trimming, quality control, alignment, and identification of differentially expressed genes. Researchers may want additional tools for data manipulation, gene ontology, etc.

In the other systems

SystemPortVersion
NetBSDwip/rna-seq1.3.0
FreeBSDbiology/rna-seq0.2.0

Install

From pkgsrc-wip (no binary package):

cd /usr/pkgsrc/wip/rna-seq && make install clean

Dependencies

Run dependencies 16

No port depends on this one.