BSD Portsbiology/scrm 1.7.4_1 DragonFly
Coalescent simulator for biological sequences
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- GPLv3
- Categories
- biology
- Package size
- 89.8 KiB, 251.9 KiB installed
Description
scrm simulates the evolution of genetic sequences. It takes a neutral evolutionary model as input, and generates random sequences that evolved under the model. As coalescent simulator, it traces the ancestry of the sampled sequences backwards in time and is therefore extremely efficient. Compared to other coalescent simulators, it can simulate chromosome-scale sequences without a measureable reduction of genetic linkage between different sites.
In the other systems
The newest version among them is 1.7.4, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| DragonFly | biology/scrm | 1.7.4_1 newest | none known | - | [email protected] | - |
| FreeBSD | biology/scrm | 1.7.4_1 newest | none known | - | [email protected] | - |
| HardenedBSD | biology/scrm | 1.7.4_1 newest | no data | - | [email protected] | - |
| GhostBSD | biology/scrm | 1.7.4_1 newest | no data | - | [email protected] | - |
Install
Binary package:
pkg install scrmFrom DPorts:
cd /usr/dports/biology/scrm && make install cleanDependencies
No port depends on this one.