BSD Ports

math/R-cran-mcmc 0.9.8 FreeBSD

Markov Chain Monte Carlo

System
FreeBSD
Repository
FreeBSD ports
Maintainer
[email protected]
Last update
Commit
ce2322be51
License
MIT
Categories
math
Package size
1216.6 KiB, 1811.4 KiB installed

Description

Simulates continuous distributions of random vectors using Markov chain Monte Carlo (MCMC). Users specify the distribution by an R function that evaluates the log unnormalized density. Algorithms are random walk Metropolis algorithm (function metrop), simulated tempering (function temper), and morphometric random walk Metropolis (Johnson and Geyer, Annals of Statistics, 2012, function morph.metrop), which achieves geometric ergodicity by change of variable.

In the other systems

SystemPortVersion
FreeBSDmath/R-cran-mcmc0.9.8
DragonFlymath/R-cran-mcmc0.9.8

Install

Binary package:

pkg install R-cran-mcmc

From the ports tree:

cd /usr/ports/math/R-cran-mcmc/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	R-cran-mcmc>0:math/R-cran-mcmc

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repositoryaarch64amd64armv6armv7i386
FreeBSD:14:latest0.9.80.9.8-0.9.80.9.8
FreeBSD:14:quarterly0.9.80.9.8n/a0.9.80.9.8
FreeBSD:15:latest0.9.80.9.8n/a0.9.80.9.8
FreeBSD:15:quarterly0.9.80.9.8n/an/an/a
FreeBSD:16:latest0.9.80.9.8n/an/an/a
FreeBSD:16:quarterlyn/an/an/an/an/a

Dependencies

The Makefile names none itself; they come from USES and USE_*.

The full lists below include those, and their dependencies in turn.

Build dependencies 86
Run dependencies 86

Configuration

No options to configure.

USES
cran:compiles,auto-plist
Service scripts
none

Files

distinfo 1
FileSizeSHA256
mcmc_0.9-8.tar.gz1.541963e+066a06440d4b58e8a7f122747d92046ff40da4bb58a20bf642228a648a0c826ea7

Commit history 1

DateCommitCreditsLog message
ce2322be51 Devin Teske Update R-cran-* WWW to modern URL
Old R-cran-* ports have https://cran.r-project.org/web/packages/${PORTNAME} New R-cran-* ports have https://cran.r-project.org/package=${PORTNAME} Replace all the old WWW URLs with new WWW URLs Reviewed by: fuz Differential Revision: https://reviews.freebsd.org/D59714