BSD Ports

math/R-cran-metafor 5.2.1 FreeBSD

Meta-analysis package for R

System
FreeBSD
Repository
FreeBSD ports
Maintainer
[email protected]
Port added
Last update
Commit
eab8b0d82c
License
GPLv2+
Categories
math

Description

A comprehensive collection of functions for conducting meta-analyses in R. The package includes functions to calculate various effect sizes or outcome measures, fit equal-, fixed-, random-, and mixed-effects models to such data, carry out moderator and meta-regression analyses, and create various types of meta-analytical plots (e.g., forest, funnel, radial, L'Abbe, Baujat, bubble, and GOSH plots). For meta-analyses of binomial and person-time data, the package also provides functions that implement specialized methods, including the Mantel-Haenszel method, Peto's method, and a variety of suitable generalized linear (mixed-effects) models (i.e., mixed-effects logistic and Poisson regression models). Finally, the package provides functionality for fitting meta-analytic multivariate/multilevel models that account for non-independent sampling errors and/or true effects (e.g., due to the inclusion of multiple treatment studies, multiple endpoints, or other forms of clustering). Network meta-analyses and meta-analyses accounting for known correlation structures (e.g., due to phylogenetic relatedness) can also be conducted. An introduction to the package can be found in Viechtbauer (2010) <doi:10.18637/jss.v036.i03>.

Install

Binary package:

pkg install R-cran-metafor

From the ports tree:

cd /usr/ports/math/R-cran-metafor/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	R-cran-metafor>0:math/R-cran-metafor

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repositoryaarch64amd64armv6armv7i386
FreeBSD:14:latest----5.2.1
FreeBSD:14:quarterly--n/a--
FreeBSD:15:latest-5.2.1n/a--
FreeBSD:15:quarterly--n/an/an/a
FreeBSD:16:latest-5.2.1n/an/an/a
FreeBSD:16:quarterlyn/an/an/an/an/a

Dependencies

As this port's Makefile names them.

Build 5

Runtime 5

The full lists below include those, and their dependencies in turn.

Build dependencies 91
Run dependencies 91
Required by 1

Configuration

No options to configure.

USES
cran:auto-plist
Service scripts
none

Files

distinfo 1
FileSizeSHA256
metafor_5.2-1.tar.gz5.037964e+0625c421cf52279294b11ab3166adfeb327dd22034a03a46487f081a19a163339b

Commit history 2

DateCommitCreditsLog message
eab8b0d82c Devin Teske */R-cran-*: Fixup WWW entries
Make consistent the domain with s/CRAN.R-project/cran.r-project/ and use the new URL not the old deprecated package URL Reviewed by: longros Differential Revision: https://reviews.freebsd.org/D60822
850ef4f5a5 Christos Longros math/R-cran-metafor: New port: Meta-analysis package for R
Reviewed by: jrm Approved by: jrm (mentor) Differential Revision: https://reviews.freebsd.org/D60718