BSD Portsmath/py-point-annotator 2.0.0_4 FreeBSD
Annotate data with labels based on the Mann-Whitney U test
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- GPLv3
- Categories
- math, python
- Package size
- 888.5 KiB, 1347.2 KiB installed
Description
The point-annotator package provides functionalities to annotate data with labels based on the Mann-Whitney U test and Hypergeometric test. Currently, we provide examples of the fast annotation of gene expression data with the cell types based on marker genes.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | math/py-point-annotator | 2.0.0_4 |
| DragonFly | math/py-point-annotator | 2.0.0_2 |
Install
Binary package:
pkg install py312-point-annotatorFrom the ports tree:
cd /usr/ports/math/py-point-annotator/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= py312-point-annotator>0:math/py-point-annotatorPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 2.0.0_4 | 2.0.0_4 | - | 2.0.0_2 | 2.0.0_4 |
| FreeBSD:14:quarterly | 2.0.0_4 | 2.0.0_4 | n/a | 2.0.0_2 | 2.0.0_4 |
| FreeBSD:15:latest | 2.0.0_4 | 2.0.0_4 | n/a | 2.0.0_2 | 2.0.0_2 |
| FreeBSD:15:quarterly | 2.0.0_4 | 2.0.0_4 | n/a | n/a | n/a |
| FreeBSD:16:latest | 2.0.0_4 | 2.0.0_4 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 1
${PYTHON_PKGNAMEPREFIX}setuptools-scm>0: devel/py-setuptools-scm
Runtime 3
${PYTHON_PKGNAMEPREFIX}numpy>=1.16: math/py-numpy${PYTHON_PKGNAMEPREFIX}pandas>0: math/py-pandas${PYTHON_PKGNAMEPREFIX}scipy>0: science/py-scipy
The full lists below include those, and their dependencies in turn.
Build dependencies 13
Run dependencies 31
- archivers/liblz4
- archivers/zstd
- databases/py-sqlite3
- databases/sqlite3
- devel/binutils
- devel/gettext-runtime
- devel/libedit
- devel/libffi
- devel/py-python-dateutil
- devel/py-pytz
- devel/py-six
- devel/py-tzdata
- devel/readline
- lang/gcc14
- lang/python312
- lang/python315
- lang/tcl86
- math/gmp
- math/libtommath
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-bottleneck
- math/py-numexpr
- math/py-numpy
- math/py-pandas
- math/qhull
- print/indexinfo
- science/py-scipy
- textproc/expat2
No port depends on this one.
Configuration
No options to configure.
- USES
- python
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| point-annotator-2.0.0.tar.gz | 912918 | 0bae70fc5aa67e39c230b56a7e10cea46d8fef3a52770721da3d382307fe33ef |
Master sites 1
- PYPI
Commit history 0
No commits in the history this site was built from.