BSD Portswip/bifrost 1.3.5nb1 NetBSD
Parallel construction, indexing and querying of de Bruijn graphs
- System
- NetBSD
- Repository
- pkgsrc-wip
- Maintainer
- [email protected]
- License
- 2-clause-bsd
- Categories
- wip, biology
Description
Bifrost is a tool and API for parallel construction, indexing and querying of colored and compacted de Bruijn graphs from FASTA/FASTQ DNA/RNA sequence files.
In the other systems
| System | Port | Version |
|---|---|---|
| NetBSD | wip/bifrost | 1.3.5nb1 |
| FreeBSD | biology/bifrost | 1.3.9 |
| HardenedBSD | biology/bifrost | 1.3.9 |
| GhostBSD | biology/bifrost | 1.3.9 |
Install
From pkgsrc-wip (no binary package):
cd /usr/pkgsrc/wip/bifrost && make install cleanDependencies
Run dependencies 1
No port depends on this one.