wip/famsa 1.2.4 NetBSD

Algorithm for large-scale multiple sequence alignments

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System: NetBSD
Repository: pkgsrc-wip
Maintainer: [email protected]
License: public-domain
Categories: wip, biology

Description

FAMSA is a progressive algorithm designed for fast and accurate alignment of thousands of protein sequences. Its features include the utilization of the longest common subsequence measure for determining pairwise similarities, a novel method of evaluating gap costs, and a new iterative refinement scheme.

Install

From pkgsrc-wip (no binary package):

cd /usr/pkgsrc/wip/famsa && make install clean

Dependencies

No port depends on this one.