wip/manatee 1.8.4.1nb3 NetBSD
Web-based gene evaluation and genome annotation tool
- System
- NetBSD
- Repository
- pkgsrc-wip
- Maintainer
- [email protected]
- Categories
- wip, biology
Description
Manatee is a web-based gene evaluation and genome annotation tool. Manatee can store and view annotation for prokaryotic and eukaryotic genomes. The Manatee interface allows biologists to quickly identify genes and make high quality functional assignments, such as GO classifications, using search data, paralogous families, and annotation suggestions generated from automated analysis. Manatee is written in Perl and run under the CGI area of a web server, such as Apache. Manatee also requires at least one Mysql (or Sybase) project database and associated search files. The project databases use a data model and schema developed at TIGR for representing Eukaryotic or Prokaryotic data.
Install
From pkgsrc-wip (no binary package):
cd /usr/pkgsrc/wip/manatee && make install clean
Dependencies
Run dependencies 16
No port depends on this one.