BSD Ports

wip/manatee 1.8.4.1nb3 NetBSD

Web-based gene evaluation and genome annotation tool

System
NetBSD
Repository
pkgsrc-wip
Maintainer
[email protected]
Categories
wip, biology

Description

Manatee is a web-based gene evaluation and genome annotation tool. Manatee can store and view annotation for prokaryotic and eukaryotic genomes. The Manatee interface allows biologists to quickly identify genes and make high quality functional assignments, such as GO classifications, using search data, paralogous families, and annotation suggestions generated from automated analysis. Manatee is written in Perl and run under the CGI area of a web server, such as Apache. Manatee also requires at least one Mysql (or Sybase) project database and associated search files. The project databases use a data model and schema developed at TIGR for representing Eukaryotic or Prokaryotic data.

Install

From pkgsrc-wip (no binary package):

cd /usr/pkgsrc/wip/manatee && make install clean

Dependencies

Run dependencies 16

No port depends on this one.