BSD Ports

wip/metal 2011.03.25 NetBSD

Meta-analysis of genomewide association scans

System
NetBSD
Repository
pkgsrc-wip
Maintainer
[email protected]
License
modified-bsd
Categories
wip, biology

Description

METAL is a tool for meta-analysis genomewide association scans. METAL can combine either (a) test statistics and standard errors or (b) p-values across studies (taking sample size and direction of effect into account). METAL analysis is a convenient alternative to a direct analysis of merged data from multiple studies. It is especially appropriate when data from the individual studies cannot be analyzed together because of differences in ethnicity, phenotype distribution, gender or constraints in sharing of individual level data imposed. Meta-analysis results in little or no loss of efficiency compared to analysis of a combined dataset including data from all individual studies.

Install

From pkgsrc-wip (no binary package):

cd /usr/pkgsrc/wip/metal && make install clean

Dependencies

Run dependencies 1

No port depends on this one.