wip/t-coffee 1.37 NetBSD

T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence alignment. Multiple sequence alignment programs are to align a set of sequences previously gathered using other programs such as blast, fasta, etc. T-Coffee allows one to combine results obtained with several aligment methods. If one alignment is from ClustalW and second is from Dialigni, T-Coffee will combine all that information and produce a new multiple sequence having the best alignment from these methods. By default, T-Coffee will compare all your sequences two by two, producing a global alignment and a series of local alignments (using lalign). The program will then combine all these alignments into amultiple alignment.