BSD Ports

wip/xssp 3.0.1 NetBSD

Software for creating DSSP and HSSP files

System
NetBSD
Repository
pkgsrc-wip
Maintainer
[email protected]
License
gnu-gpl-v3
Categories
wip, biology

Description

Software for creating DSSP and HSSP files. DSSP is a database of secondary structure assignments (and much more) for all protein entries in the Protein Data Bank (PDB). DSSP is also the program that calculates DSSP entries from PDB entries. DSSP does not predict secondary structure. HSSP is a database that combines structural and sequence information about proteins. This database has the information of the alignment of all available homologs of proteins from the PDB database As a result of this, HSSP is also a database of homology-based implied protein structures

Install

From pkgsrc-wip (no binary package):

cd /usr/pkgsrc/wip/xssp && make install clean

Dependencies

Run dependencies 2

No port depends on this one.