BSD Portsbiology/fasda-utils 0.1.0.2_1 FreeBSD
Fast and simple differential analysis extras
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- BSD2CLAUSE
- Categories
- biology
- Package size
- 4.9 KiB, 7.1 KiB installed
Description
FASDA aims to provide a fast and simple differential analysis tool that just works and does not require any knowledge beyond basic Unix command-line skills. The code is written entirely in C to maximize efficiency and portability, and to provide a simple command-line user interface.
FASDA-utils is a collection of optional companion programs and scripts. They are separated from the main FASDA distribution in order to keep FASDA packages minimal.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | biology/fasda-utils | 0.1.0.2_1 |
| NetBSD | wip/fasda-utils | 0.1.0.5 |
| HardenedBSD | biology/fasda-utils | 0.1.0.2_1 |
| GhostBSD | biology/fasda-utils | 0.1.0.2_1 |
Install
Binary package:
pkg install fasda-utilsFrom the ports tree:
cd /usr/ports/biology/fasda-utils/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= fasda-utils>0:biology/fasda-utilsPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 0.1.0.2_1 | 0.1.0.2_1 | - | 0.1.0.2 | 0.1.0.2_1 |
| FreeBSD:14:quarterly | 0.1.0.2_1 | 0.1.0.2_1 | n/a | 0.1.0.2 | 0.1.0.2_1 |
| FreeBSD:15:latest | 0.1.0.2_1 | 0.1.0.2_1 | n/a | 0.1.0.2 | 0.1.0.2 |
| FreeBSD:15:quarterly | 0.1.0.2_1 | 0.1.0.2_1 | n/a | n/a | n/a |
| FreeBSD:16:latest | 0.1.0.2_1 | 0.1.0.2_1 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Runtime 2
${PYTHON_PKGNAMEPREFIX}seaborn>=0: math/py-seaborn${PYTHON_PKGNAMEPREFIX}fastcluster>=0: math/py-fastcluster
The full lists below include those, and their dependencies in turn.
Run dependencies 98
- archivers/brotli
- archivers/libdeflate
- archivers/liblz4
- archivers/py-brotli
- archivers/py-zopfli
- archivers/zopfli
- archivers/zstd
- converters/fribidi
- converters/libiconv
- databases/py-sqlite3
- databases/sqlite3
- devel/binutils
- devel/gettext-runtime
- devel/glib20
- devel/libedit
- devel/libffi
- devel/libinotify
- devel/pcre2
- devel/py-cycler
- devel/py-interface-meta
- devel/py-lxml
- devel/py-olefile
- devel/py-packaging
- devel/py-pyparsing
- devel/py-python-dateutil
- devel/py-pytz
- devel/py-six
- devel/py-typing-extensions
- devel/py-tzdata
- devel/py-unicodedata2
- devel/py-wrapt
- devel/readline
- graphics/gdk-pixbuf2
- graphics/giflib
- graphics/graphite2
- graphics/jbigkit
- graphics/jpeg-turbo
- graphics/lcms2
- graphics/lerc
- graphics/libavif
- graphics/libimagequant
- graphics/libyuv
- graphics/openjpeg
- graphics/png
- graphics/py-pillow
- graphics/tiff
- graphics/webp
- lang/gcc14
- lang/python312
- lang/python315
- lang/tcl86
- math/gmp
- math/libtommath
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-bottleneck
- math/py-contourpy
- math/py-fastcluster
- math/py-formulaic
- math/py-kiwisolver
- math/py-matplotlib
- math/py-narwhals
- math/py-numexpr
- math/py-numpy
- math/py-pandas
- math/py-patsy
- math/py-seaborn
- math/py-statsmodels
- math/qhull
- misc/shared-mime-info
- multimedia/aom
- multimedia/dav1d
- multimedia/vmaf
- print/freetype2
- print/harfbuzz
- print/indexinfo
- print/libraqm
- print/py-fonttools
- science/py-scipy
- security/libgcrypt
- security/libgpg-error
- textproc/expat2
- textproc/libxml2
- textproc/libxslt
- x11-fonts/fontconfig
- x11-fonts/libXft
- x11-toolkits/py-tkinter
- x11-toolkits/tk86
- x11/libX11
- x11/libXScrnSaver
- x11/libXau
- x11/libXdmcp
- x11/libXext
- x11/libXrender
- x11/libxcb
- x11/xorgproto
Required by 3
Configuration
No options to configure.
- USES
- python:run shebangfix
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| auerlab-fasda-utils-0.1.0-2-gf9217f0_GH0.tar.gz | 4910 | 6dfa802e31e7f0f8a1721ac2f00b5a535999d8b78a54b550d5baea96476b5f9f |
Commit history 0
No commits in the history this site was built from.