math/py-fastcluster 1.3.0_3

Fast hierarchical clustering routines for R and Python

Repository: FreeBSD ports
Maintainer: [email protected]
License: BSD2CLAUSE
Categories: math, python
Package size: 35.2 KiB, 115.7 KiB installed

Description

This library provides Python functions for hierarchical clustering. It generates hierarchical clusters from distance matrices or from vector data.

Part of this module is intended to replace the functions (linkage, single, complete, average, weighted, centroid, median, ward) in the module scipy.cluster.hierarchy with the same functionality but much faster algorithms. Moreover, the function linkage_vector provides memory-efficient clustering for vector data.

The interface is very similar to MATLAB's Statistics Toolbox API to make code easier to port from MATLAB to Python/NumPy. The core implementation of this library is in C++ for efficiency.

Install

As a binary package — by origin, or by package name:

pkg install math/py-fastcluster
pkg install py312-fastcluster

From the ports tree:

cd /usr/ports/math/py-fastcluster/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	py312-fastcluster>0:math/py-fastcluster

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repository	aarch64	amd64	armv6	armv7	i386
FreeBSD:14:latest	1.3.0_3	1.3.0_3	-	1.2.6_2	1.3.0_3
FreeBSD:14:quarterly	1.3.0_3	1.3.0_3	n/a	1.2.6_2	1.3.0_3
FreeBSD:15:latest	1.3.0_3	1.3.0_3	n/a	1.2.6_2	1.2.6_2
FreeBSD:15:quarterly	1.3.0_3	1.3.0_3	n/a	n/a	n/a
FreeBSD:16:latest	1.3.0_3	1.3.0_3	n/a	n/a	n/a
FreeBSD:16:quarterly	n/a	n/a	n/a	n/a	n/a

Repository

aarch64

amd64

armv6

armv7

i386

FreeBSD:14:latest

1.3.0_3

1.2.6_2

1.3.0_3

FreeBSD:14:quarterly

1.3.0_3

n/a

1.2.6_2

1.3.0_3

FreeBSD:15:latest

1.3.0_3

n/a

1.2.6_2

FreeBSD:15:quarterly

1.3.0_3

n/a

FreeBSD:16:latest

1.3.0_3

n/a

FreeBSD:16:quarterly

n/a

Dependencies

As this port's Makefile names them.

Build 3

${PYTHON_PKGNAMEPREFIX}numpy>=2,1 : math/py-numpy
${PYTHON_PKGNAMEPREFIX}setuptools>=0 : devel/py-setuptools
${PYTHON_PKGNAMEPREFIX}wheel>=0 : devel/py-wheel

Runtime 1

${PYTHON_PKGNAMEPREFIX}numpy>=2,1 : math/py-numpy

The full lists below include those, and their dependencies in turn.

All build dependencies 23

All run dependencies 16

Required by 4

Configuration

No options to configure.

USES: compiler python
Service scripts: none

Files

distinfo 1

File	Size	SHA256
fastcluster-1.3.0.tar.gz	173065	d5233aeba5c3faa949c7fa6a39345a09f716ccebbd748541e5735c866696df02

File

Size

SHA256

fastcluster-1.3.0.tar.gz

173065

d5233aeba5c3faa949c7fa6a39345a09f716ccebbd748541e5735c866696df02

Master sites 1

PYPI

Commit history 0

No commits in the history this site was built from.