BSD Ports

biology/libsedml 2.0.34 FreeBSD

C++ SED-ML library

System
FreeBSD
Repository
FreeBSD ports
Maintainer
[email protected]
Last update
Commit
896c0ef498
License
BSD2CLAUSE
Categories
biology, devel
Package size
1972.3 KiB, 14055.5 KiB installed

Description

The libSEDML project makes use of libSBML XML layer as well as code generation as starting point to produce a library for reading and writing of SED-ML models.

In the other systems

SystemPortVersion
FreeBSDbiology/libsedml2.0.34
DragonFlybiology/libsedml2.0.32

Install

Binary package:

pkg install libsedml

From the ports tree:

cd /usr/ports/biology/libsedml/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	libsedml>0:biology/libsedml
LIB_DEPENDS=	libsedml.so:biology/libsedml

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repositoryaarch64amd64armv6armv7i386
FreeBSD:14:latest2.0.342.0.342.0.322.0.33_12.0.34
FreeBSD:14:quarterly2.0.342.0.34n/a2.0.33_12.0.34
FreeBSD:15:latest2.0.342.0.34n/a2.0.33_12.0.33_1
FreeBSD:15:quarterly2.0.342.0.34n/an/an/a
FreeBSD:16:latest2.0.342.0.34n/an/an/a
FreeBSD:16:quarterlyn/an/an/an/an/a

Dependencies

As this port's Makefile names them.

Build 2

Runtime 2

The full lists below include those, and their dependencies in turn.

Build dependencies 18
Run dependencies 10
Required by 1

Configuration

No options to configure.

USES
cmake:testing compiler:c++11-lang gnome
Service scripts
none

Files

pkg-plist 121
  • include/sedml/SedAbstractCurve.h
  • include/sedml/SedAbstractTask.h
  • include/sedml/SedAddXML.h
  • include/sedml/SedAdjustableParameter.h
  • include/sedml/SedAlgorithm.h
  • include/sedml/SedAlgorithmParameter.h
  • include/sedml/SedAnalysis.h
  • include/sedml/SedAppliedDimension.h
  • include/sedml/SedAxis.h
  • include/sedml/SedBase.h
  • include/sedml/SedBounds.h
  • include/sedml/SedChange.h
  • include/sedml/SedChangeAttribute.h
  • include/sedml/SedChangeXML.h
  • include/sedml/SedComputeChange.h
  • include/sedml/SedConstructorException.h
  • include/sedml/SedCurve.h
  • include/sedml/SedDataDescription.h
  • include/sedml/SedDataGenerator.h
  • include/sedml/SedDataRange.h
  • include/sedml/SedDataSet.h
  • include/sedml/SedDataSource.h
  • include/sedml/SedDocument.h
  • include/sedml/SedElementFilter.h
  • include/sedml/SedError.h
  • include/sedml/SedErrorLog.h
  • include/sedml/SedErrorTable.h
  • include/sedml/SedExperimentReference.h
  • include/sedml/SedFigure.h
  • include/sedml/SedFill.h
  • include/sedml/SedFitExperiment.h
  • include/sedml/SedFitMapping.h
  • include/sedml/SedFunctionalRange.h
  • include/sedml/SedLeastSquareObjectiveFunction.h
  • include/sedml/SedLine.h
  • include/sedml/SedListOf.h
  • include/sedml/SedListOfAdjustableParameters.h
  • include/sedml/SedListOfAlgorithmParameters.h
  • include/sedml/SedListOfAppliedDimensions.h
  • include/sedml/SedListOfChanges.h
  • include/sedml/SedListOfCurves.h
  • include/sedml/SedListOfDataDescriptions.h
  • include/sedml/SedListOfDataGenerators.h
  • include/sedml/SedListOfDataSets.h
  • include/sedml/SedListOfDataSources.h
  • include/sedml/SedListOfExperimentReferences.h
  • include/sedml/SedListOfFitExperiments.h
  • include/sedml/SedListOfFitMappings.h
  • include/sedml/SedListOfModels.h
  • include/sedml/SedListOfOutputs.h
  • include/sedml/SedListOfParameters.h
  • include/sedml/SedListOfRanges.h
  • include/sedml/SedListOfSetValues.h
  • include/sedml/SedListOfSimulations.h
  • include/sedml/SedListOfSlices.h
  • include/sedml/SedListOfStyles.h
  • include/sedml/SedListOfSubPlots.h
  • include/sedml/SedListOfSubTasks.h
  • include/sedml/SedListOfSurfaces.h
  • include/sedml/SedListOfTasks.h
  • include/sedml/SedListOfVariables.h
  • include/sedml/SedMarker.h
  • include/sedml/SedModel.h
  • include/sedml/SedNamespaces.h
  • include/sedml/SedNonUniformTimeCourse.h
  • include/sedml/SedObjective.h
  • include/sedml/SedOneStep.h
  • include/sedml/SedOutput.h
  • include/sedml/SedParameter.h
  • include/sedml/SedParameterEstimationReport.h
  • include/sedml/SedParameterEstimationResultPlot.h
  • include/sedml/SedParameterEstimationTask.h
  • include/sedml/SedPlot.h
  • include/sedml/SedPlot2D.h
  • include/sedml/SedPlot3D.h
  • include/sedml/SedRange.h
  • include/sedml/SedReader.h
  • include/sedml/SedRemoveXML.h
  • include/sedml/SedRepeatedTask.h
  • include/sedml/SedReport.h
  • include/sedml/SedSetValue.h
  • include/sedml/SedShadedArea.h
  • include/sedml/SedSimulation.h
  • include/sedml/SedSlice.h
  • include/sedml/SedSpecificTimeCourse.h
  • include/sedml/SedSteadyState.h
  • include/sedml/SedStyle.h
  • include/sedml/SedSubPlot.h
  • include/sedml/SedSubTask.h
  • include/sedml/SedSurface.h
  • include/sedml/SedTask.h
  • include/sedml/SedTypeCodes.h
  • include/sedml/SedTypes.h
  • include/sedml/SedUniformRange.h
  • include/sedml/SedUniformTimeCourse.h
  • include/sedml/SedVariable.h
  • include/sedml/SedVectorRange.h
  • include/sedml/SedVisitor.h
  • include/sedml/SedWaterfallPlot.h
  • include/sedml/SedWriter.h

The first 100 are listed.

distinfo 1
FileSizeSHA256
fbergmann-libSEDML-v2.0.34_GH0.tar.gz1.017479e+06e2214b6fcf6360391c383f58c4198877819c45a483fe1eb4ab1cfa2e0c3fcac1

Commit history 1

DateCommitCreditsLog message
896c0ef498 Yuri Victorovich biology/{,py-}libsedml: update 2.0.33 → 2.0.34