biology/p5-Bio-Coordinate 1.007001 FreeBSD

Modules for working with biological coordinates

System: FreeBSD
Repository: FreeBSD ports
Maintainer: [email protected]
License: ART10, GPLv1+
Categories: biology, perl5
Package size: 58.8 KiB, 179.4 KiB installed

Description

Bio::Coordinate classes are used for working with various biological coordinate systems. See Bio::Coordinate::Collection and Bio::Collection::Pair for examples.

In the other systems

System

Port

Version

FreeBSD

biology/p5-Bio-Coordinate

1.007001

DragonFly

biology/p5-Bio-Coordinate

1.007001

HardenedBSD

biology/p5-Bio-Coordinate

1.007001

GhostBSD

biology/p5-Bio-Coordinate

1.007001

Install

Binary package:

pkg install p5-Bio-Coordinate

From the ports tree:

cd /usr/ports/biology/p5-Bio-Coordinate/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	p5-Bio-Coordinate>0:biology/p5-Bio-Coordinate

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repository	aarch64	amd64	armv6	armv7	i386
FreeBSD:14:latest	1.007001	1.007001	1.007001	1.007001	1.007001
FreeBSD:14:quarterly	1.007001	1.007001	n/a	1.007001	1.007001
FreeBSD:15:latest	1.007001	1.007001	n/a	1.007001	1.007001
FreeBSD:15:quarterly	1.007001	1.007001	n/a	n/a	n/a
FreeBSD:16:latest	1.007001	1.007001	n/a	n/a	n/a
FreeBSD:16:quarterly	n/a	n/a	n/a	n/a	n/a

Dependencies

As this port's Makefile names them.

Build 1

p5-BioPerl>=1.007000 : biology/p5-BioPerl

Runtime 1

p5-BioPerl>=1.007000 : biology/p5-BioPerl

The full lists below include those, and their dependencies in turn.

Build dependencies 76

Run dependencies 76

Required by 1

biology/p5-Bio-Graphics

Configuration

No options to configure.

USES: perl5
Service scripts: none

Files

pkg-plist 26

%%SITE_PERL%%/Bio/Coordinate.pm
%%SITE_PERL%%/Bio/Coordinate/Chain.pm
%%SITE_PERL%%/Bio/Coordinate/Collection.pm
%%SITE_PERL%%/Bio/Coordinate/ExtrapolatingPair.pm
%%SITE_PERL%%/Bio/Coordinate/GeneMapper.pm
%%SITE_PERL%%/Bio/Coordinate/Graph.pm
%%SITE_PERL%%/Bio/Coordinate/MapperI.pm
%%SITE_PERL%%/Bio/Coordinate/Pair.pm
%%SITE_PERL%%/Bio/Coordinate/Result.pm
%%SITE_PERL%%/Bio/Coordinate/Result/Gap.pm
%%SITE_PERL%%/Bio/Coordinate/Result/Match.pm
%%SITE_PERL%%/Bio/Coordinate/ResultI.pm
%%SITE_PERL%%/Bio/Coordinate/Utils.pm
%%PERL5_MAN3%%/Bio::Coordinate.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::Chain.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::Collection.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::ExtrapolatingPair.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::GeneMapper.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::Graph.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::MapperI.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::Pair.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::Result.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::Result::Gap.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::Result::Match.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::ResultI.3.gz
%%PERL5_MAN3%%/Bio::Coordinate::Utils.3.gz

distinfo 1

File

Size

SHA256

Bio-Coordinate-1.007001.tar.gz

44111

63c0a652ec60a2a905d71c85c08b96fcfb12fc784cac8a5d029eb9647d45d619

Master sites 1

CPAN

Commit history 0

No commits in the history this site was built from.