BSD Portsbiology/tabixpp 1.1.2 FreeBSD
C++ wrapper to tabix indexer
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
2414383046- License
- MIT
- Categories
- biology
- Package size
- 16.5 KiB, 61.6 KiB installed
Description
This is a C++ wrapper around tabix project which abstracts some of the details of opening and jumping in tabix-indexed files. Tabix is a generic indexer for TAB-delimited genome position files.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | biology/tabixpp | 1.1.2 |
| DragonFly | biology/tabixpp | 1.1.2 |
Install
Binary package:
pkg install tabixppFrom the ports tree:
cd /usr/ports/biology/tabixpp/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= tabixpp>0:biology/tabixppPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 1.1.2 | 1.1.2 | 1.0.0.10_2 | - | 1.1.2 |
| FreeBSD:14:quarterly | 1.1.2 | 1.1.2 | n/a | - | 1.1.2 |
| FreeBSD:15:latest | 1.1.2 | 1.1.2 | n/a | - | 1.1.2 |
| FreeBSD:15:quarterly | 1.1.2 | 1.1.2 | n/a | n/a | n/a |
| FreeBSD:16:latest | 1.1.2 | 1.1.2 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Library 1
libhts.so: biology/htslib
The full lists below include those, and their dependencies in turn.
Build dependencies 12
Run dependencies 12
Required by 1
Configuration
No options to configure.
- USES
- compiler:c11 localbase:ldflags
- Service scripts
- none
Message after installing
===> NOTICE: The tabixpp port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| vcflib-tabixpp-v1.1.2_GH0.tar.gz | 6962 | c850299c3c495221818a85c9205c60185c8ed9468d5ec2ed034470bb852229dc |