BSD Portsbiology/bowtie2 2.5.4 DragonFly
Ultrafast, memory-efficient short read aligner
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- GPLv3+
- Categories
- biology, perl5, python
- Package size
- 8907.7 KiB, 25592.3 KiB installed
Description
Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour.
In the other systems
The newest version among them is 2.5.5, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| DragonFly | biology/bowtie2 | 2.5.4 | none known | - | [email protected] | - |
| FreeBSD | biology/bowtie2 | 2.5.5 newest | none known | - | [email protected] | 2026-10-08 |
| NetBSD | biology/bowtie2 | 2.5.4 | none known | - | [email protected] | - |
| HardenedBSD | biology/bowtie2 | 2.5.5 newest | no data | - | [email protected] | - |
| GhostBSD | biology/bowtie2 | 2.5.5 newest | no data | - | [email protected] | - |
Install
Binary package:
pkg install bowtie2From DPorts:
cd /usr/dports/biology/bowtie2 && make install cleanDependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 3
No port depends on this one.