BSD Ports

biology/dsr-pdb 1.0.3_15 DragonFly

Simple C++ PDB reader (reads the protein description format)

System
DragonFly
Repository
DPorts
Maintainer
[email protected] (as in FreeBSD)
License
LGPL21
Categories
biology
Package size
223.6 KiB, 1818.8 KiB installed

Description

dsr-pdb is a simple C++ PDB reader along with a couple of programs which use it to manipulate pdb files (applying a rigid transform or splitting/merging). The are aimed at people interested in proteins from a geometric viewpoint as they allow easy access to the geometry and bond structure in addition of the biological information. The reader has two modes for reading/writing a pdb file. The simplest one, through the Protein class just reads and writes a single protein from/to a pdb file (which must have only one chain, but can have multiple models). The second, through the PDB class can handle pdb files with multiple models and herogens (although these are just passed through and not currently interpreted).

In the other systems

The newest version among them is 1.0.3, as upstream numbers it.

SystemPortVersionVulnerabilitiesStatusMaintainerLast update
DragonFlybiology/dsr-pdb1.0.3_15 newestnone known-[email protected]-
FreeBSDbiology/dsr-pdb1.0.3_19 newestnone known-[email protected]2026-09-29
HardenedBSDbiology/dsr-pdb1.0.3_19 newestno data-[email protected]-
GhostBSDbiology/dsr-pdb1.0.3_18 newestno data-[email protected]-

Install

Binary package:

pkg install dsr-pdb

From DPorts:

cd /usr/dports/biology/dsr-pdb && make install clean

Dependency graph

Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.

Dependencies

Run dependencies 1

No port depends on this one.