biology/dsr-pdb 1.0.3_15 DragonFly
Simple C++ PDB reader (reads the protein description format)
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- LGPL21
- Categories
- biology
- Package size
- 223.6 KiB, 1818.8 KiB installed
Description
dsr-pdb is a simple C++ PDB reader along with a couple of programs which use it to manipulate pdb files (applying a rigid transform or splitting/merging). The are aimed at people interested in proteins from a geometric viewpoint as they allow easy access to the geometry and bond structure in addition of the biological information. The reader has two modes for reading/writing a pdb file. The simplest one, through the Protein class just reads and writes a single protein from/to a pdb file (which must have only one chain, but can have multiple models). The second, through the PDB class can handle pdb files with multiple models and herogens (although these are just passed through and not currently interpreted).
In the other systems
The newest version among them is 1.0.3, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| DragonFly | biology/dsr-pdb | 1.0.3_15 newest | none known | - | [email protected] | - |
| FreeBSD | biology/dsr-pdb | 1.0.3_19 newest | none known | - | [email protected] | 2026-09-29 |
| HardenedBSD | biology/dsr-pdb | 1.0.3_19 newest | no data | - | [email protected] | - |
| GhostBSD | biology/dsr-pdb | 1.0.3_18 newest | no data | - | [email protected] | - |
Install
Binary package:
pkg install dsr-pdb
From DPorts:
cd /usr/dports/biology/dsr-pdb && make install clean
Dependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 1
No port depends on this one.