BSD Portsbiology/hisat2 2.2.1_2 DragonFly
Alignment program for mapping next-generation sequencing reads
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- GPLv3
- Categories
- biology, perl5, python
- Package size
- 1055.6 KiB, 4767.2 KiB installed
Description
HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) to a population of human genomes (as well as to a single reference genome).
In the other systems
The newest version among them is 2.2.3, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| DragonFly | biology/hisat2 | 2.2.1_2 behind since 2026-08-31 | none known | - | [email protected] | - |
| FreeBSD | biology/hisat2 | 2.2.3 newest | none known | - | [email protected] | 2026-10-08 |
| NetBSD | biology/hisat2 | 2.2.1nb4 behind since 2026-08-31 | none known | - | [email protected] | 2026-08-04 |
| HardenedBSD | biology/hisat2 | 2.2.3 newest | no data | - | [email protected] | - |
| GhostBSD | biology/hisat2 | 2.2.3 newest | no data | - | [email protected] | - |
Install
Binary package:
pkg install hisat2From DPorts:
cd /usr/dports/biology/hisat2 && make install cleanDependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 2
No port depends on this one.