BSD Ports

biology/libgff 2.0.0 DragonFly

GFF/GTF parsing library based on GCLib

System
DragonFly
Repository
DPorts
Maintainer
[email protected] (as in FreeBSD)
License
BSL
Categories
biology
Package size
124.4 KiB, 547.7 KiB installed

Description

This is an attempt to perform a simple "libraryfication" of the GFF/GTF parsing code that is used in GFFRead codebase. There are not many (any?) relatively lightweight GTF/GFF parsers exposing a C++ interface, and the goal of this library is to provide this functionality without the necessity of drawing in a heavy-weight dependency like SeqAn. Note: This library draws directly from the code in GFFRead and GCLib, and exists primarily to remove functionality (and hence code) that is unnecessary for our downstream purposes. In the future, it may be appropriate to just replace this library wholesale with GCLib.

In the other systems

SystemPortVersion
DragonFlybiology/libgff2.0.0
FreeBSDbiology/libgff2.0.1
HardenedBSDbiology/libgff2.0.1
GhostBSDbiology/libgff2.0.1

Install

Binary package:

pkg install libgff

From DPorts:

cd /usr/dports/biology/libgff && make install clean

Dependencies

No port depends on this one.