BSD Portsbiology/megahit 1.2.9_1 DragonFly
Ultra-fast single-node large and complex metagenomics assembly
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- GPLv3
- Categories
- biology
- Package size
- 606.8 KiB, 4297.1 KiB installed
Description
MEGAHIT is a single node assembler for large and complex metagenomics NGS reads, such as soil. It makes use of succinct de Bruijn graph (SdBG) to achieve low memory assembly. MEGAHIT can optionally utilize a CUDA-enabled GPU to accelerate its SdBG contstruction.
In the other systems
The newest version among them is 1.2.9.22, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| DragonFly | biology/megahit | 1.2.9_1 behind since 2026-09-19 | none known | - | [email protected] | - |
| FreeBSD | biology/megahit | 1.2.9.22 newest | none known | - | [email protected] | 2026-10-08 |
| HardenedBSD | biology/megahit | 1.2.9.22 newest | no data | - | [email protected] | - |
| GhostBSD | biology/megahit | 1.2.9.22 newest | no data | - | [email protected] | - |
Install
Binary package:
pkg install megahitFrom DPorts:
cd /usr/dports/biology/megahit && make install cleanDependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 1
No port depends on this one.