BSD Portsbiology/p5-transdecoder 5.7.1 DragonFly
Identify candidate coding regions within transcript sequences
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- BSD3CLAUSE
- Categories
- biology, perl5
- Package size
- 84.7 KiB, 461.8 KiB installed
Description
TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.
In the other systems
| System | Port | Version |
|---|---|---|
| DragonFly | biology/p5-transdecoder | 5.7.1 |
| FreeBSD | biology/p5-transdecoder | 6.0.0 |
| NetBSD | wip/p5-transdecoder | 5.3.0 |
| HardenedBSD | biology/p5-transdecoder | 6.0.0 |
| GhostBSD | biology/p5-transdecoder | 6.0.0 |
Install
Binary package:
pkg install p5-transdecoderFrom DPorts:
cd /usr/dports/biology/p5-transdecoder && make install cleanDependencies
Run dependencies 3
No port depends on this one.