BSD Portswip/p5-transdecoder 5.3.0 NetBSD
Identify candidate coding regions within transcript sequences
- System
- NetBSD
- Repository
- pkgsrc-wip
- Maintainer
- [email protected]
- License
- modified-bsd
- Categories
- wip, biology
Description
TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.
In the other systems
| System | Port | Version |
|---|---|---|
| NetBSD | wip/p5-transdecoder | 5.3.0 |
| FreeBSD | biology/p5-transdecoder | 6.0.0 |
| DragonFly | biology/p5-transdecoder | 5.7.1 |
| HardenedBSD | biology/p5-transdecoder | 6.0.0 |
| GhostBSD | biology/p5-transdecoder | 6.0.0 |
Install
From pkgsrc-wip (no binary package):
cd /usr/pkgsrc/wip/p5-transdecoder && make install clean