BSD Portswip/trinity 2.8.3 NetBSD
Assembles transcript sequences from Illumina RNA-Seq data
- System
- NetBSD
- Repository
- pkgsrc-wip
- Maintainer
- [email protected]
- License
- modified-bsd
- Categories
- wip, biology
Description
Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-seq reads.
Install
From pkgsrc-wip (no binary package):
cd /usr/pkgsrc/wip/trinity && make install cleanDependencies
Run dependencies 13
No port depends on this one.